# Interpretation - Athena Coverage report

Athena is a tool to generate coverage statistics for NGS data, and combine these into an interactive HTML report. This gives both summary level and in depth information as to the coverage of the data, including various tables and plots to visualise the data. Examples of the output statistics files and [report](https://htmlpreview.github.io/?https://github.com/eastgenomics/athena/blob/master/data/example/Example_coverage_report.html) may be found in `data/example`. Athena can also optionally include plots visualising per-chromosome level coverage - refer to this [report](https://htmlpreview.github.io/?https://github.com/eastgenomics/athena/blob/master/data/example/Example_coverage_report.with_per_chromosome_coverage.html) for an example. More details can be found [here](https://github.com/eastgenomics/athena)

Credits

Jethro Rainford - Cambridge University Hospital UK