Command Line Tools (CWL)

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Command Line Tools (CWL)

MSK-ACCESS command-line tools
ABRA2
access_utils
bcftools
Bedtools
Biometrics
Delly
Disambiguate
Fastp
Fgbio
GATK
GetBaseCountsMultiSample
Manta
Marianas
MultiQC
MuTect
Merge Fastq
Mosdepth
Octopus
Oncokb_annotator
Picard Tools
Postprocessing variant calls
sequence_qc
SnpSift
Trim Galore
Ubuntu utilites
VarDictJava
VCF2MAF
Waltz
- CountReads v3.1.1
- PileupMetrics v3.1.1

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Waltz

CountReads v3.1.1 PileupMetrics v3.1.1

Previous1.6.21 NextCountReads v3.1.1

Last updated 3 years ago