v2.22

Version of tools in docker image (/container/Dockerfile)

Tool	Version	Location
openjdk	8	-
ABRA2	2.22	https://github.com/mozack/abra2/releases/download/v2.22/abra2-2.22.jar

CWL

• CWL specification 1.0

• Use example_inputs.yaml to see the inputs to the cwl

• Example Command using toil:

    > toil-cwl-runner abra2_2.22.cwl example_inputs.yaml