Tool descriptions and versions for Bam Collapsing workflow
Tool
Version
Fgbio GroupReadsByUmiarrow-up-right
1.2.0
Fgbio CollectDuplexSeqMetricsarrow-up-right
Fgbio CallDuplexConsensusReadsarrow-up-right
GATK SamToFastqarrow-up-right
4.1.8.0
BWA memarrow-up-right
0.7.17
Picard AddOrReplaceReadGroupsarrow-up-right
4.1.8.1
GATK MergeBamAlignmentarrow-up-right
bedtools genomecovarrow-up-right
2.28.0_cv2
bedtools mergearrow-up-right
ABRA2arrow-up-right
2.22
Picard FixMateInformationarrow-up-right
Fgbio FilterConsensusReadsarrow-up-right
Fgbio Post-processingarrow-up-right
0.1.8
Picard CollectAlignmentSummaryMetricsarrow-up-right
2.8.1
Last updated 5 years ago
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