# Outputs Description

|                 File Name                 |                                    File Description                                   |
| :---------------------------------------: | :-----------------------------------------------------------------------------------: |
|      **sample-name\_fastp\_out.html**     |                       Trimming metrics from fastp in html format                      |
|      **sample-name\_fastp\_out.json**     |                       Trimming metrics from fastp in json format                      |
|          **sample-name\_fx.bam**          |           Binary alignment map (BAM) file generated after FixMateInformation          |
|          **sample-name\_fx.bai**          | The binary alignment index (BAI) file associated with the FixMateInformation bam file |
| **sample-name\_duplication\_metrics.txt** |                       Metrics file for MarkDuplicated bam file.                       |
