Installation

Creating a conda environment for running the pipeline

1. Installing conda

Conda installation tutorial can be found here

2. Creating conda environment and installing R/python packages

conda create --name access_data_analysis python=3
conda activate access_data_analysis
conda install r-essentials r-base r-argparse r-ggpubr r-ggthemes r-plotly r-kableextra r-htmlwidgets r-dt
pip install genotype-variants