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Requirements

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The following requirements need to be fulfilled before running the pipeline.

  • A system with either dockerarrow-up-right or singularityarrow-up-right configured.

  • Python 3.6 and above (for running and running )

    • Python Packages :

      • toil[cwl]

cwltool
  • Python Virtual Environment using or .

  • cwltoolarrow-up-right
    toil-cwl-runnerarrow-up-right
    virtualenvarrow-up-right
    condaarrow-up-right