> For the complete documentation index, see [llms.txt](https://cmo-ci.gitbook.io/biometrics/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://cmo-ci.gitbook.io/biometrics/readme.md).

# biometrics

Python package for genotyping samples, calculating sample contamination metrics, and sample sex verification.

[![Build Status](https://travis-ci.com/msk-access/biometrics.svg?branch=master)](https://travis-ci.com/msk-access/biometrics) [![PyPi](https://img.shields.io/pypi/v/biometrics.svg?)](https://pypi.python.org/pypi/biometrics)

* Free software: Apache Software License 2.0
* Documentation: <https://msk-access.gitbook.io/biometrics/>

## Installation

From pypi:

`pip install biometrics`

From conda (python v3.6 only):

`conda create -n myenv -c bioconda -c conda-forge -c msk-access python=3.6 biometrics`